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HIV-1 reverse transcriptase crosslinked to template-primer with tenofovir-diphosphate bound as the incoming nucleotide substrate
Sequence Clustering and Redundancy Reduction Results
1T05
Sequence Clusters for the Sequence Entities in PDB 1T05
Entity #1: Chains: T - oligonucleotide template dna, length: 27 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: P - oligonucleotide primer dna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - POL polyprotein protein, length: 558 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 6 5396
95% 182 210 78
90% 182 210 82
70% 182 210 103
50% 183 211 142
40% 183 211 155
30% 183 211 171
Entity #4: Chains: B - POL polyprotein protein, length: 437 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 5 11564
95% 177 204 87
90% 177 204 92
70% 177 204 113
50% 178 205 148
40% 178 205 162
30% 178 205 180
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.