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An Information Portal to 110071 Biological Macromolecular Structures

HIV-1 reverse transcriptase crosslinked to template-primer with tenofovir-diphosphate bound as the incoming nucleotide substrate
Sequence Clustering and Redundancy Reduction Results
1T05
Sequence Clusters for the Sequence Entities in PDB 1T05
Entity #1: Chains: T - oligonucleotide template dna, length: 27 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: P - oligonucleotide primer dna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - POL polyprotein protein, length: 558 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 6 5325
95% 180 208 80
90% 180 208 83
70% 180 208 101
50% 181 209 139
40% 181 209 154
30% 181 209 171
Entity #4: Chains: B - POL polyprotein protein, length: 437 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 5 11412
95% 175 202 87
90% 175 202 92
70% 175 202 112
50% 176 203 146
40% 176 203 163
30% 176 203 182
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.