Sequence Similarity Clusters for the Entities in PDB 1T05

Entity #1 | Chains: T
oligonucleotide template dna, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
oligonucleotide primer dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
POL polyprotein protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 6513
95 % 206 236 104
90 % 206 236 108
70 % 206 236 123
50 % 207 237 149
40 % 207 237 166
30 % 207 237 183
Entity #4 | Chains: B
POL polyprotein protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 6553
95 % 201 230 111
90 % 201 230 116
70 % 201 230 136
50 % 202 231 160
40 % 202 231 177
30 % 202 231 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.