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An Information Portal to 105906 Biological Macromolecular Structures

HIV-1 reverse transcriptase crosslinked to template-primer with tenofovir-diphosphate bound as the incoming nucleotide substrate
Sequence Clustering and Redundancy Reduction Results
1T05
Sequence Clusters for the Sequence Entities in PDB 1T05
Entity #1: Chains: T - oligonucleotide template dna, length: 27 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: P - oligonucleotide primer dna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - POL polyprotein protein, length: 558 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 6 5085
95% 174 202 62
90% 174 202 65
70% 174 202 81
50% 175 203 118
40% 175 203 141
30% 175 203 164
Entity #4: Chains: B - POL polyprotein protein, length: 437 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 5 10910
95% 169 196 69
90% 169 196 73
70% 169 196 90
50% 170 197 120
40% 170 197 147
30% 170 197 174
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.