Sequence Similarity Clusters for the Entities in PDB 1SVT

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L,M,N
groEL protein protein, length: 524 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 21 62
95 % 10 43 13 Flexibility: Medium
Max RMSD: 15.0, Avg RMSD: 5.6
PDBFlex
90 % 10 43 14
70 % 10 43 22
50 % 13 50 17
40 % 13 50 27
30 % 13 50 44
Entity #2 | Chains: O,P,Q,R,S,T,U
groES protein protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 14 225
95 % 1 14 317 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.2
PDBFlex
90 % 1 14 335
70 % 1 14 371
50 % 3 20 272
40 % 3 20 288
30 % 3 20 295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.