Sequence Similarity Clusters for the Entities in PDB 1SVM

Entity #1 | Chains: A,B,C,D,E,F
large T antigen protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 892
95 % 1 7 1199 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 1 7 1227
70 % 2 11 1159
50 % 2 11 1197
40 % 2 11 1213
30 % 2 11 1185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.