Sequence Similarity Clusters for the Entities in PDB 1SVM

Entity #1 | Chains: A,B,C,D,E,F
large T antigen protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 915
95 % 1 7 1235 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 1 7 1264
70 % 2 11 1183
50 % 2 11 1230
40 % 2 11 1244
30 % 2 11 1216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures