Sequence Similarity Clusters for the Entities in PDB 1SVM

Entity #1 | Chains: A,B,C,D,E,F
large T antigen protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 1073
95 % 1 7 1282 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 1 7 1305
70 % 2 11 1228
50 % 2 11 1279
40 % 2 11 1265
30 % 2 11 1267

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures