Sequence Similarity Clusters for the Entities in PDB 1SVA

Entity #1 | Chains: 1,2,3,4,5,6
SIMIAN VIRUS 40 protein, length: 361 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 11846
95 % 1 1 11609 Flexibility: Medium
Max RMSD: 7.7, Avg RMSD: 5.4
PDBFlex
90 % 1 1 11451
70 % 1 2 5442
50 % 1 5 1932
40 % 1 5 1937
30 % 1 5 1869

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.