Sequence Similarity Clusters for the Entities in PDB 1STP

Entity #1 | Chains: A
STREPTAVIDIN COMPLEX WITH BIOTIN protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16267
95 % 31 31 1620 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 32 32 1596
70 % 33 33 1561
50 % 33 33 1603
40 % 33 33 1585
30 % 33 33 1560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures