Sequence Similarity Clusters for the Entities in PDB 1SQ2

Entity #1 | Chains: L
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 117 583 3
95 % 118 636 4
90 % 121 653 5
70 % 131 868 6
50 % 131 877 6
40 % 132 911 10
30 % 132 911 17
Entity #2 | Chains: N
novel antigen receptor protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26074
95 % 1 2 21631
90 % 1 2 20949
70 % 2 6 5579
50 % 2 17 1678
40 % 40 774 5
30 % 48 899 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.