Sequence Similarity Clusters for the Entities in PDB 1SOQ

Entity #1 | Chains: A,B,C,D
Transthyretin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 13735
95 % 271 291 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 271 291 11
70 % 273 297 14
50 % 277 301 20
40 % 277 301 30
30 % 285 313 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.