Sequence Similarity Clusters for the Entities in PDB 1SOK

Entity #1 | Chains: A,B
Transthyretin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 14940
95 % 143 295 10 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 143 295 12
70 % 143 301 16
50 % 144 305 22
40 % 144 305 36
30 % 146 317 48

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures