Sequence Similarity Clusters for the Entities in PDB 1SMT

Entity #1 | Chains: A,B
TRANSCRIPTIONAL REPRESSOR SMTB protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13241
95 % 3 4 9388 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 3 4 9283
70 % 3 4 8845
50 % 3 4 8006
40 % 3 4 7345
30 % 3 4 6476

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.