Sequence Similarity Clusters for the Entities in PDB 1SMT

Entity #1 | Chains: A,B
TRANSCRIPTIONAL REPRESSOR SMTB protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 9160
95 % 3 4 9090 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 3 4 8990
70 % 3 4 8632
50 % 3 4 7880
40 % 3 4 7224
30 % 3 4 6293

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures