Sequence Similarity Clusters for the Entities in PDB 1SMF

Entity #1 | Chains: E
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 358 389 37
95 % 409 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 409 448 34
70 % 465 532 19
50 % 538 683 14
40 % 1168 1698 4
30 % 1257 1848 6
Entity #2 | Chains: I
BOWMAN-BIRK TYPE TRYPSIN INHIBITOR protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75384
95 % 1 2 37290
90 % 1 2 35600
70 % 1 2 31681
50 % 1 2 27129
40 % 1 2 24002
30 % 1 2 20455

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures