Sequence Similarity Clusters for the Entities in PDB 1SMF

Entity #1 | Chains: E
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 389 431 25
95 % 430 477 27 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 430 477 30
70 % 490 567 17
50 % 563 719 13
40 % 1312 1929 4
30 % 1319 1943 6
Entity #2 | Chains: I
BOWMAN-BIRK TYPE TRYPSIN INHIBITOR protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 46557
95 % 1 2 38829
90 % 1 2 37006
70 % 1 2 32763
50 % 1 2 27888
40 % 1 2 24456
30 % 1 2 20362

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures