Sequence Similarity Clusters for the Entities in PDB 1SMF

Entity #1 | Chains: E
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 385 425 32
95 % 426 471 19 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 426 471 22
70 % 484 558 19
50 % 557 708 14
40 % 1274 1873 4
30 % 1281 1887 7
Entity #2 | Chains: I
BOWMAN-BIRK TYPE TRYPSIN INHIBITOR protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 43732
95 % 1 2 36557
90 % 1 2 34901
70 % 1 2 31038
50 % 1 2 26432
40 % 1 2 23197
30 % 1 2 19330

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures