Sequence Similarity Clusters for the Entities in PDB 1SMF

Entity #1 | Chains: E
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 352 383 40
95 % 403 442 31 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.4
PDBFlex
90 % 403 442 33
70 % 459 526 18
50 % 532 677 14
40 % 1160 1682 4
30 % 1249 1831 6
Entity #2 | Chains: I
BOWMAN-BIRK TYPE TRYPSIN INHIBITOR protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73312
95 % 1 2 36319
90 % 1 2 34713
70 % 1 2 30990
50 % 1 2 26580
40 % 1 2 23526
30 % 1 2 20040

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.