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An Information Portal to 110071 Biological Macromolecular Structures

Studies on an artificial trypsin inhibitor peptide derived from the mung bean inhibitor
Sequence Clustering and Redundancy Reduction Results
1SMF
Sequence Clusters for the Sequence Entities in PDB 1SMF
Entity #1: Chains: E - TRYPSIN protein, length: 223 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 338 364 11
95% 389 423 13
90% 389 423 14
70% 441 502 13
50% 506 644 9
40% 1027 1515 3
30% 1107 1644 6
Entity #2: Chains: I - BOWMAN-BIRK TYPE TRYPSIN INHIBITOR protein, length: 22 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 61561
95% 1 2 30035
90% 1 2 28839
70% 1 2 25933
50% 1 2 22402
40% 1 2 19935
30% 1 2 17043
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.