Sequence Similarity Clusters for the Entities in PDB 1SMD

Entity #1 | Chains: A
AMYLASE protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 14833
95 % 14 60 836 Flexibility: No
Max RMSD: 1.6, Avg RMSD: 0.4
PDBFlex
90 % 14 60 872
70 % 15 78 587
50 % 15 82 601
40 % 15 91 579
30 % 15 91 572

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures