Sequence Similarity Clusters for the Entities in PDB 1SMD

Entity #1 | Chains: A
AMYLASE protein, length: 496 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 14493
95 % 13 59 821 Flexibility: No
Max RMSD: 1.6, Avg RMSD: 0.4
PDBFlex
90 % 13 59 855
70 % 14 77 588
50 % 14 81 597
40 % 14 90 570
30 % 14 90 570

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.