Sequence Similarity Clusters for the Entities in PDB 1SHY

Entity #1 | Chains: A
Hepatocyte growth factor protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 15819
95 % 5 5 14802 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 5 5 14561
70 % 5 5 13670
50 % 5 5 12144
40 % 1810 1863 4
30 % 1827 1885 6
Entity #2 | Chains: B
Hepatocyte growth factor receptor protein, length: 551 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52731
95 % 4 4 16133 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 4 4 15830
70 % 4 4 14838
50 % 4 4 13138
40 % 4 4 11881
30 % 5 5 9241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures