Sequence Similarity Clusters for the Entities in PDB 1SHY

Entity #1 | Chains: A
Hepatocyte growth factor protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 15448
95 % 5 5 14487 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 5 5 14260
70 % 5 5 13403
50 % 5 5 11918
40 % 1674 1719 4
30 % 1814 1869 6
Entity #2 | Chains: B
Hepatocyte growth factor receptor protein, length: 551 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51762
95 % 4 4 15806 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 4 4 15516
70 % 4 4 14555
50 % 4 4 12900
40 % 4 4 11674
30 % 5 5 9079

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures