Sequence Similarity Clusters for the Entities in PDB 1SHY

Entity #1 | Chains: A
Hepatocyte growth factor protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 15191
95 % 5 5 14280 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 5 5 14046
70 % 5 5 13200
50 % 5 5 11741
40 % 1652 1695 4
30 % 1792 1845 6
Entity #2 | Chains: B
Hepatocyte growth factor receptor protein, length: 551 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51041
95 % 4 4 15576 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 4 4 15283
70 % 4 4 14328
50 % 4 4 12707
40 % 4 4 11507
30 % 5 5 8943

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.