Sequence Similarity Clusters for the Entities in PDB 1SGZ

Entity #1 | Chains: A,B,C,D
Beta-secretase protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 135 280 25
95 % 190 368 15 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.9
PDBFlex
90 % 190 368 17
70 % 190 368 24
50 % 193 380 54
40 % 193 380 75
30 % 777 1126 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures