Sequence Similarity Clusters for the Entities in PDB 1SDD

Entity #1 | Chains: A
Coagulation factor V protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56006
95 % 1 1 40139
90 % 1 1 38351
70 % 1 1 34060
50 % 1 1 29094
40 % 1 1 25683
30 % 1 1 21831
Entity #2 | Chains: B
Coagulation factor V protein, length: 647 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50513
95 % 1 1 37565
90 % 1 1 35890
70 % 1 1 31975
50 % 1 1 27410
40 % 1 5 10221
30 % 1 5 8924

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.