Sequence Similarity Clusters for the Entities in PDB 1SBW

Entity #1 | Chains: A
PROTEIN (BETA-TRYPSIN) protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 251 389 37
95 % 281 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 281 448 34
70 % 314 532 19
50 % 335 683 14
40 % 610 1698 4
30 % 639 1848 6
Entity #2 | Chains: I
PROTEIN (MUNG BEAN INHIBITOR LYSIN ACTIVE FRAGMENT) protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74495
95 % 1 1 51928
90 % 1 1 49251
70 % 1 1 43117
50 % 1 1 36774
40 % 1 1 32395
30 % 1 1 27447

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures