Sequence Similarity Clusters for the Entities in PDB 1SA0

Entity #1 | Chains: A,C
Tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14550
95 % 86 169 75 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 86 170 79
70 % 88 177 91
50 % 88 177 123
40 % 174 352 28
30 % 180 362 41
Entity #2 | Chains: B,D
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 77 175
95 % 85 165 79 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 85 170 75
70 % 87 175 90
50 % 87 175 122
40 % 175 352 28
30 % 181 362 41
Entity #3 | Chains: E
Stathmin 4 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 59 65 556
95 % 71 78 596 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 71 78 621
70 % 71 78 668
50 % 71 78 714
40 % 71 78 742
30 % 71 78 743

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.