Sequence Similarity Clusters for the Entities in PDB 1SA0

Entity #1 | Chains: A,C
Tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15141
95 % 98 181 71 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 98 182 75
70 % 100 190 89
50 % 100 190 117
40 % 198 378 25
30 % 204 388 43
Entity #2 | Chains: B,D
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 77 185
95 % 97 177 72 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 97 182 71
70 % 99 188 88
50 % 99 188 116
40 % 199 378 25
30 % 205 388 43
Entity #3 | Chains: E
Stathmin 4 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 69 75 458
95 % 81 88 521 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 81 88 550
70 % 81 88 578
50 % 81 88 616
40 % 81 88 655
30 % 81 88 641

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures