Sequence Similarity Clusters for the Entities in PDB 1S9T

Entity #1 | Chains: A,B
Glutamate receptor, ionotropic kainate 2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 2974
95 % 21 30 681 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.7
PDBFlex
90 % 21 31 633
70 % 48 86 217
50 % 146 272 35
40 % 146 273 47
30 % 160 289 54

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.