Sequence Similarity Clusters for the Entities in PDB 1S9T

Entity #1 | Chains: A,B
Glutamate receptor, ionotropic kainate 2 protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 3035
95 % 21 30 695 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.7
PDBFlex
90 % 21 31 644
70 % 48 86 235
50 % 146 272 36
40 % 146 273 48
30 % 160 289 58

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures