Sequence Similarity Clusters for the Entities in PDB 1S9E

Entity #1 | Chains: A
POL polyprotein [Contains:Reverse transcriptase] protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 24 1233
95 % 125 236 104
90 % 125 236 108
70 % 125 236 123
50 % 126 237 149
40 % 126 237 166
30 % 126 237 183
Entity #2 | Chains: B
POL polyprotein [Contains: Reverse transcriptase] protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 93 212
95 % 121 230 111
90 % 121 230 116
70 % 121 230 136
50 % 122 231 160
40 % 122 231 177
30 % 122 231 192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.