Sequence Similarity Clusters for the Entities in PDB 1S9E

Entity #1 | Chains: A
POL polyprotein [Contains:Reverse transcriptase] protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 24 1107
95 % 115 224 104
90 % 115 224 109
70 % 115 224 123
50 % 116 225 150
40 % 116 225 168
30 % 116 225 183
Entity #2 | Chains: B
POL polyprotein [Contains: Reverse transcriptase] protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 85 215
95 % 111 218 109
90 % 111 218 114
70 % 111 218 131
50 % 112 219 156
40 % 112 219 173
30 % 112 219 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.