Sequence Similarity Clusters for the Entities in PDB 1S7Y

Entity #1 | Chains: A,B
Glutamate receptor, ionotropic kainate 2 precursor protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 15 1789
95 % 18 30 721 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.7
PDBFlex
90 % 18 31 664
70 % 41 88 238
50 % 120 278 37
40 % 120 279 50
30 % 152 360 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures