Sequence Similarity Clusters for the Entities in PDB 1S6Q

Entity #1 | Chains: A
POL polyprotein [Contains: Reverse transcriptase] protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 19 1784
95 % 178 216 99
90 % 178 216 104
70 % 178 216 120
50 % 179 217 149
40 % 179 217 162
30 % 179 217 181
Entity #2 | Chains: B
POL polyprotein [Contains: Reverse transcriptase] protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 79 230
95 % 173 210 109
90 % 173 210 113
70 % 173 210 131
50 % 174 211 158
40 % 174 211 171
30 % 174 211 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.