Sequence Similarity Clusters for the Entities in PDB 1S6Q

Entity #1 | Chains: A
POL polyprotein [Contains: Reverse transcriptase] protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 24 1181
95 % 190 230 106
90 % 190 230 110
70 % 190 230 125
50 % 191 231 153
40 % 191 231 169
30 % 191 231 185
Entity #2 | Chains: B
POL polyprotein [Contains: Reverse transcriptase] protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 67 87 217
95 % 185 224 114
90 % 185 224 120
70 % 185 224 137
50 % 186 225 164
40 % 186 225 178
30 % 186 225 194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.