Sequence Similarity Clusters for the Entities in PDB 1S6P

Entity #1 | Chains: A
POL polyprotein [Contains: Reverse transcriptase] protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 24 1215
95 % 177 231 107
90 % 177 231 112
70 % 177 231 129
50 % 178 232 157
40 % 178 232 171
30 % 178 232 189
Entity #2 | Chains: B
POL polyprotein [Contains: Reverse transcriptase] protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 88 224
95 % 172 225 116
90 % 172 225 119
70 % 172 225 136
50 % 173 226 165
40 % 173 226 180
30 % 173 226 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.