Sequence Similarity Clusters for the Entities in PDB 1S6P

Entity #1 | Chains: A
POL polyprotein [Contains: Reverse transcriptase] protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 24 1122
95 % 175 228 103
90 % 175 228 107
70 % 175 228 120
50 % 176 229 147
40 % 176 229 163
30 % 176 229 182
Entity #2 | Chains: B
POL polyprotein [Contains: Reverse transcriptase] protein, length: 430 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 58 85 217
95 % 170 222 110
90 % 170 222 115
70 % 170 222 133
50 % 171 223 158
40 % 171 223 174
30 % 171 223 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.