Sequence Similarity Clusters for the Entities in PDB 1S3T

Entity #1 | Chains: A
Urease gamma subunit protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 6377
95 % 12 12 5265
90 % 12 12 5268
70 % 32 43 1109
50 % 33 45 918
40 % 33 45 946
30 % 33 45 936
Entity #2 | Chains: B
Urease beta subunit protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 4590
95 % 12 12 5216
90 % 12 12 5220
70 % 12 12 5118
50 % 12 12 4836
40 % 12 12 4560
30 % 12 12 4123
Entity #3 | Chains: C
Urease alpha subunit protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 6586
95 % 12 12 4548
90 % 12 12 4575
70 % 12 12 4536
50 % 32 48 774
40 % 32 48 802
30 % 32 48 803

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.