Sequence Similarity Clusters for the Entities in PDB 1S3T

Entity #1 | Chains: A
Urease gamma subunit protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 6528
95 % 12 12 5381
90 % 12 12 5384
70 % 32 43 1139
50 % 33 45 941
40 % 33 45 962
30 % 33 45 955
Entity #2 | Chains: B
Urease beta subunit protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 4715
95 % 12 12 5332
90 % 12 12 5336
70 % 12 12 5232
50 % 12 12 4946
40 % 12 12 4668
30 % 12 12 4213
Entity #3 | Chains: C
Urease alpha subunit protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 6747
95 % 12 12 4662
90 % 12 12 4683
70 % 12 12 4643
50 % 32 48 790
40 % 32 48 817
30 % 32 48 815

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.