Sequence Similarity Clusters for the Entities in PDB 1S3T

Entity #1 | Chains: A
Urease gamma subunit protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 6605
95 % 12 12 5445
90 % 12 12 5448
70 % 32 43 1147
50 % 33 45 960
40 % 33 45 977
30 % 33 45 967
Entity #2 | Chains: B
Urease beta subunit protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 4770
95 % 12 12 5393
90 % 12 12 5398
70 % 12 12 5290
50 % 12 12 4993
40 % 12 12 4713
30 % 12 12 4248
Entity #3 | Chains: C
Urease alpha subunit protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 6822
95 % 12 12 4717
90 % 12 12 4743
70 % 12 12 4698
50 % 32 48 804
40 % 32 48 832
30 % 32 48 827

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.