Sequence Similarity Clusters for the Entities in PDB 1S3T

Entity #1 | Chains: A
Urease gamma subunit protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 9 6443
95 % 12 12 5332
90 % 12 12 5336
70 % 32 43 1122
50 % 33 45 932
40 % 33 45 956
30 % 33 45 948
Entity #2 | Chains: B
Urease beta subunit protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 12 4651
95 % 12 12 5283
90 % 12 12 5288
70 % 12 12 5185
50 % 12 12 4904
40 % 12 12 4622
30 % 12 12 4178
Entity #3 | Chains: C
Urease alpha subunit protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 6658
95 % 12 12 4617
90 % 12 12 4641
70 % 12 12 4601
50 % 32 48 785
40 % 32 48 812
30 % 32 48 812

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.