Sequence Similarity Clusters for the Entities in PDB 1S2E

Entity #1 | Chains: A,B
Baseplate structural protein Gp9 protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 484
95 % 1 7 602 Flexibility: Medium
Max RMSD: 10.3, Avg RMSD: 7.0
PDBFlex
90 % 1 7 630
70 % 1 7 676
50 % 1 7 729
40 % 1 7 755
30 % 1 7 764

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures