Sequence Similarity Clusters for the Entities in PDB 1S1X

Entity #1 | Chains: A
Reverse transcriptase protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52697
95 % 149 257 110 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 149 257 114
70 % 149 257 128
50 % 150 258 156
40 % 150 259 167
30 % 150 259 177
Entity #2 | Chains: B
Reverse transcriptase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54240
95 % 144 251 118
90 % 144 251 122
70 % 144 251 137
50 % 145 253 164
40 % 145 253 175
30 % 145 253 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures