Sequence Similarity Clusters for the Entities in PDB 1S1X

Entity #1 | Chains: A
Reverse transcriptase protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51958
95 % 148 255 91 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 148 255 95
70 % 148 255 112
50 % 149 256 151
40 % 149 257 164
30 % 149 257 176
Entity #2 | Chains: B
Reverse transcriptase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53469
95 % 143 249 115
90 % 143 249 119
70 % 143 249 134
50 % 144 251 159
40 % 144 251 174
30 % 144 251 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures