Sequence Similarity Clusters for the Entities in PDB 1S1W

Entity #1 | Chains: A
Reverse transcriptase protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51239
95 % 77 248 94 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 77 248 99
70 % 77 248 117
50 % 78 249 151
40 % 78 249 166
30 % 78 249 180
Entity #2 | Chains: B
Reverse transcriptase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52734
95 % 74 242 118 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 74 242 123
70 % 74 242 139
50 % 75 243 158
40 % 75 243 175
30 % 75 243 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures