Sequence Similarity Clusters for the Entities in PDB 1S1U

Entity #1 | Chains: A
Reverse transcriptase protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 65 107 261
95 % 195 277 88 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 195 277 92
70 % 195 277 107
50 % 196 278 144
40 % 197 279 156
30 % 197 279 173
Entity #2 | Chains: B
Reverse transcriptase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 83 435
95 % 190 271 109 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 190 271 115
70 % 190 271 126
50 % 192 273 152
40 % 192 273 167
30 % 192 273 182

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures