Sequence Similarity Clusters for the Entities in PDB 1S1U

Entity #1 | Chains: A
Reverse transcriptase protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 65 107 254
95 % 176 258 115 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 176 258 119
70 % 176 258 135
50 % 177 259 163
40 % 178 260 173
30 % 178 260 192
Entity #2 | Chains: B
Reverse transcriptase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 83 418
95 % 171 252 121 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 171 252 124
70 % 171 252 141
50 % 173 254 169
40 % 173 254 183
30 % 173 254 202

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures