Sequence Similarity Clusters for the Entities in PDB 1RZK

Entity #1 | Chains: G
ENVELOPE GLYCOPROTEIN GP120 protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 2451
95 % 5 9 3122
90 % 7 12 2303
70 % 21 31 1013
50 % 21 31 1063
40 % 21 31 1088
30 % 74 111 242
Entity #2 | Chains: C
T-CELL SURFACE GLYCOPROTEIN CD4 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 34 685
95 % 24 39 759
90 % 24 39 798
70 % 24 39 845
50 % 24 39 909
40 % 24 39 933
30 % 24 39 927
Entity #3 | Chains: L
ANTIBODY 17B, LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1178
95 % 18 23 1437
90 % 319 461 4
70 % 1079 1526 3
50 % 2605 3692 1
40 % 2606 3693 1
30 % 3026 4355 1
Entity #4 | Chains: H
ANTIBODY 17B, HEAVY CHAIN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1176
95 % 18 23 1432
90 % 18 23 1458
70 % 1262 1790 1
50 % 2606 3692 1
40 % 2607 3693 1
30 % 3027 4355 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.