Sequence Similarity Clusters for the Entities in PDB 1RZK

Entity #1 | Chains: G
ENVELOPE GLYCOPROTEIN GP120 protein, length: 313 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 2509
95 % 5 9 3198
90 % 7 12 2359
70 % 78 120 165
50 % 78 120 196
40 % 78 120 211
30 % 78 123 222
Entity #2 | Chains: C
T-CELL SURFACE GLYCOPROTEIN CD4 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 34 702
95 % 24 39 783
90 % 24 39 819
70 % 24 39 865
50 % 24 39 930
40 % 24 39 956
30 % 24 39 951
Entity #3 | Chains: L
ANTIBODY 17B, LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1198
95 % 18 23 1467
90 % 327 476 4
70 % 1105 1568 3
50 % 2672 3813 1
40 % 2673 3814 1
30 % 3145 4537 1
Entity #4 | Chains: H
ANTIBODY 17B, HEAVY CHAIN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 20 1196
95 % 18 23 1463
90 % 18 23 1492
70 % 1295 1850 1
50 % 2673 3813 1
40 % 2674 3814 1
30 % 3146 4537 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.