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HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B
Sequence Clustering and Redundancy Reduction Results
1RZJ
Sequence Clusters for the Sequence Entities in PDB 1RZJ
Entity #1: Chains: G - ENVELOPE GLYCOPROTEIN GP120 protein, length: 321 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 26299
95% 11 15 2816
90% 11 15 2862
70% 14 27 1154
50% 14 27 1216
40% 14 27 1250
30% 14 29 1149
Entity #2: Chains: C - T-CELL SURFACE GLYCOPROTEIN CD4 protein, length: 185 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 27 953
95% 17 32 1027
90% 17 32 1049
70% 17 32 1080
50% 17 32 1145
40% 17 32 1178
30% 17 32 1163
Entity #3: Chains: L - ANTIBODY 17B, LIGHT CHAIN protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 13 17 1429
95% 13 20 1577
90% 179 360 4
70% 665 1274 3
50% 1589 3031 1
40% 1590 3032 1
30% 1794 3590 1
Entity #4: Chains: H - ANTIBODY 17B, HEAVY CHAIN protein, length: 229 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 13 17 1426
95% 13 20 1573
90% 13 20 1621
70% 772 1461 2
50% 1590 3031 1
40% 1591 3032 1
30% 1795 3590 1
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.