Sequence Similarity Clusters for the Entities in PDB 1RZJ

Entity #1 | Chains: G
ENVELOPE GLYCOPROTEIN GP120 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31174
95 % 11 15 3489
90 % 11 15 3526
70 % 62 120 165
50 % 62 120 196
40 % 62 120 212
30 % 62 123 222
Entity #2 | Chains: C
T-CELL SURFACE GLYCOPROTEIN CD4 protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 34 715
95 % 17 39 812
90 % 17 39 851
70 % 17 39 900
50 % 17 39 947
40 % 17 39 968
30 % 17 39 962
Entity #3 | Chains: L
ANTIBODY 17B, LIGHT CHAIN protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 20 1205
95 % 13 23 1474
90 % 234 482 4
70 % 809 1583 3
50 % 1977 3846 1
40 % 1978 3847 1
30 % 2264 4574 1
Entity #4 | Chains: H
ANTIBODY 17B, HEAVY CHAIN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 20 1203
95 % 13 23 1470
90 % 13 23 1499
70 % 965 1866 1
50 % 1978 3846 1
40 % 1979 3847 1
30 % 2265 4574 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.