Sequence Similarity Clusters for the Entities in PDB 1RZG

Entity #1 | Chains: A,C
Fab 412d light chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21246
95 % 1 2 18506 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 1 2 18113
70 % 562 2366 2
50 % 1162 4892 1
40 % 1162 4892 1
30 % 1283 5759 1
Entity #2 | Chains: B,D
Fab 412d heavy chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21790
95 % 1 2 18888 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 179 762 2
70 % 563 2416 1
50 % 1163 4892 1
40 % 1163 4892 1
30 % 1284 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures