Sequence Similarity Clusters for the Entities in PDB 1RZG

Entity #1 | Chains: A,C
Fab 412d light chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21094
95 % 1 2 18393 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.2
PDBFlex
90 % 1 2 18011
70 % 555 2342 2
50 % 1148 4843 1
40 % 1148 4843 1
30 % 1268 5705 1
Entity #2 | Chains: B,D
Fab 412d heavy chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21639
95 % 1 2 18777 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 174 746 3
70 % 556 2392 1
50 % 1149 4843 1
40 % 1149 4843 1
30 % 1269 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures