Sequence Similarity Clusters for the Entities in PDB 1RZ8

Entity #1 | Chains: A,C
Fab 17b light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 21 1522
95 % 13 34 1082 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.8
PDBFlex
90 % 322 762 2
70 % 1058 2519 1
50 % 2165 5107 1
40 % 2489 5756 1
30 % 3033 7175 1
Entity #2 | Chains: B,D
Fab 17b heavy chain protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30648
95 % 10 25 1454 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.0
PDBFlex
90 % 10 25 1481
70 % 1049 2478 2
50 % 2166 5107 1
40 % 2490 5756 1
30 % 3034 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1RZ8 2 B, D Fab 17b heavy chain 9606