Sequence Similarity Clusters for the Entities in PDB 1RZ8

Entity #1 | Chains: A,C
Fab 17b light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 21 1274
95 % 12 32 1118 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 0.9
PDBFlex
90 % 280 701 3
70 % 947 2287 1
50 % 1939 4633 1
40 % 1939 4633 1
30 % 2189 5461 1
Entity #2 | Chains: B,D
Fab 17b heavy chain protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 21 1272
95 % 10 25 1398 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.0
PDBFlex
90 % 10 25 1422
70 % 939 2244 2
50 % 1940 4633 1
40 % 1940 4633 1
30 % 2190 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.