Sequence Similarity Clusters for the Entities in PDB 1RZ8

Entity #1 | Chains: A,C
Fab 17b light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 22 1485
95 % 12 34 1107 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.2
PDBFlex
90 % 357 844 2
70 % 1128 2696 1
50 % 2314 5473 1
40 % 2653 6175 1
30 % 3211 7645 1
Entity #2 | Chains: B,D
Fab 17b heavy chain protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 26 1210
95 % 10 26 1444 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.0
PDBFlex
90 % 10 26 1471
70 % 1120 2655 2
50 % 2315 5473 1
40 % 2654 6175 1
30 % 3212 7645 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures