Sequence Similarity Clusters for the Entities in PDB 1RZ8

Entity #1 | Chains: A,C
Fab 17b light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 22 1529
95 % 12 34 1144 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.2
PDBFlex
90 % 364 865 2
70 % 1146 2765 1
50 % 2363 5625 1
40 % 2714 6382 1
30 % 3297 7934 1
Entity #2 | Chains: B,D
Fab 17b heavy chain protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 26 1249
95 % 10 26 1490 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.0
PDBFlex
90 % 10 26 1511
70 % 1143 2728 2
50 % 2364 5625 1
40 % 2715 6382 1
30 % 3298 7934 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures