Sequence Similarity Clusters for the Entities in PDB 1RZ7

Entity #1 | Chains: L
Fab 48d light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16716
95 % 1 5 10072 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 2.2
PDBFlex
90 % 194 761 2
70 % 593 2516 1
50 % 1223 5101 1
40 % 1441 5750 1
30 % 1759 7168 1
Entity #2 | Chains: H
Fab 48d heavy chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 16507
95 % 1 5 10047
90 % 1 5 9918
70 % 593 2475 2
50 % 1224 5101 1
40 % 1442 5750 1
30 % 1760 7168 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1RZ7 2 H Fab 48d heavy chain 9606
2 3JWD 4 H, P FAB 48D HEAVY CHAIN 9606
3 4DVR 3 H Fab 48d Heavy chain 9606
4 3JWO 4 H FAB 48D Heavy CHAIN 9606