Sequence Similarity Clusters for the Entities in PDB 1RYP

Entity #1 | Chains: A,O
20S PROTEASOME protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 13
95 % 2 252 23
90 % 2 252 25
70 % 2 252 33
50 % 11 280 47
40 % 11 281 53
30 % 73 1989 3
Entity #10 | Chains: J,X
20S PROTEASOME protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 16
95 % 2 252 28
90 % 2 252 30
70 % 2 252 38
50 % 11 280 48
40 % 11 281 54
30 % 11 281 72
Entity #11 | Chains: K,Y
20S PROTEASOME protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 251 17
95 % 2 251 29
90 % 2 251 31
70 % 2 251 39
50 % 2 251 73
40 % 11 280 57
30 % 11 280 75
Entity #12 | Chains: L,Z
20S PROTEASOME protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5025
95 % 2 199 57
90 % 2 199 62
70 % 11 253 27
50 % 11 254 65
40 % 11 254 86
30 % 24 557 12
Entity #13 | Chains: 1,M
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 219 24
95 % 2 252 25
90 % 2 252 27
70 % 2 252 35
50 % 2 252 71
40 % 11 280 56
30 % 11 281 71
Entity #14 | Chains: 2,N
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 9
95 % 2 252 18
90 % 2 252 21
70 % 2 252 29
50 % 2 252 70
40 % 11 270 62
30 % 11 270 78
Entity #2 | Chains: B,P
20S PROTEASOME protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 14
95 % 2 252 24
90 % 2 252 26
70 % 2 252 34
50 % 11 281 44
40 % 43 1144 3
30 % 74 1989 3
Entity #3 | Chains: C,Q
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 11
95 % 2 252 21
90 % 2 252 23
70 % 2 252 31
50 % 11 281 43
40 % 44 1144 3
30 % 75 1989 3
Entity #4 | Chains: D,R
20S PROTEASOME protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 12
95 % 2 252 22
90 % 2 252 24
70 % 2 252 32
50 % 11 281 46
40 % 45 1144 3
30 % 76 1989 3
Entity #5 | Chains: E,S
20S PROTEASOME protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 10
95 % 2 252 19
90 % 2 253 19
70 % 2 253 28
50 % 11 282 40
40 % 46 1144 3
30 % 77 1989 3
Entity #6 | Chains: F,T
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 250 18
95 % 2 252 26
90 % 2 252 28
70 % 2 252 36
50 % 11 281 45
40 % 11 281 55
30 % 78 1989 3
Entity #7 | Chains: G,U
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 442
95 % 1 36 612
90 % 1 36 642
70 % 1 36 684
50 % 10 65 334
40 % 10 65 355
30 % 79 1989 3
Entity #8 | Chains: H,V
20S PROTEASOME protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 252 15
95 % 2 252 27
90 % 2 252 29
70 % 2 252 37
50 % 11 270 50
40 % 11 270 63
30 % 25 557 12
Entity #9 | Chains: I,W
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 217 23
95 % 2 252 20
90 % 2 252 22
70 % 2 252 30
50 % 11 281 42
40 % 11 281 52
30 % 11 281 70

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.