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CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST AT 2.4 ANGSTROMS RESOLUTION
Sequence Clustering and Redundancy Reduction Results
1RYP
Sequence Clusters for the Sequence Entities in PDB 1RYP
Entity #1: Chains: A,O - 20S PROTEASOME protein, length: 243 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 92
95% 2 75 133
90% 2 75 143
70% 2 75 171
50% 2 80 190
40% 2 80 218
30% 10 576 9
Entity #10: Chains: J,X - 20S PROTEASOME protein, length: 204 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 96
95% 2 75 138
90% 2 75 148
70% 2 75 176
50% 2 80 193
40% 2 80 221
30% 2 80 236
Entity #11: Chains: K,Y - 20S PROTEASOME protein, length: 198 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 74 99
95% 2 74 145
90% 2 74 156
70% 2 74 184
50% 2 74 223
40% 2 79 222
30% 2 79 241
Entity #12: Chains: L,Z - 20S PROTEASOME protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 3761
95% 2 68 160
90% 2 68 173
70% 2 68 202
50% 2 73 207
40% 2 73 239
30% 6 176 32
Entity #13: Chains: 1,M - 20S PROTEASOME protein, length: 222 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 94
95% 2 75 135
90% 2 75 145
70% 2 75 173
50% 2 75 214
40% 2 80 219
30% 2 80 235
Entity #14: Chains: 2,N - 20S PROTEASOME protein, length: 233 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 88
95% 2 75 129
90% 2 75 140
70% 2 75 168
50% 2 75 213
40% 2 80 217
30% 2 80 234
Entity #2: Chains: B,P - 20S PROTEASOME protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 93
95% 2 75 134
90% 2 75 144
70% 2 75 172
50% 2 80 191
40% 7 336 11
30% 11 576 9
Entity #3: Chains: C,Q - 20S PROTEASOME protein, length: 244 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 90
95% 2 75 131
90% 2 75 141
70% 2 75 169
50% 2 80 188
40% 8 336 11
30% 12 576 9
Entity #4: Chains: D,R - 20S PROTEASOME protein, length: 241 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 91
95% 2 75 132
90% 2 75 142
70% 2 75 170
50% 2 80 189
40% 9 336 11
30% 13 576 9
Entity #5: Chains: E,S - 20S PROTEASOME protein, length: 242 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 89
95% 2 75 130
90% 2 76 138
70% 2 76 162
50% 2 81 184
40% 10 336 11
30% 14 576 9
Entity #6: Chains: F,T - 20S PROTEASOME protein, length: 233 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 73 101
95% 2 75 136
90% 2 75 146
70% 2 75 174
50% 2 75 215
40% 2 75 246
30% 15 576 9
Entity #7: Chains: G,U - 20S PROTEASOME protein, length: 244 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 36 283
95% 1 36 403
90% 1 36 427
70% 1 36 457
50% 1 41 412
40% 1 41 440
30% 16 576 9
Entity #8: Chains: H,V - 20S PROTEASOME protein, length: 205 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 95
95% 2 75 137
90% 2 75 147
70% 2 75 175
50% 2 80 192
40% 2 80 220
30% 7 176 32
Entity #9: Chains: I,W - 20S PROTEASOME protein, length: 222 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 68 109
95% 2 68 159
90% 2 68 172
70% 2 68 201
50% 2 73 206
40% 2 73 238
30% 2 73 255
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.