Sequence Similarity Clusters for the Entities in PDB 1RYP

Entity #1 | Chains: A,O
20S PROTEASOME protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 16
95 % 2 206 27
90 % 2 206 30
70 % 2 206 38
50 % 11 225 64
40 % 11 226 78
30 % 73 1600 3
Entity #10 | Chains: J,X
20S PROTEASOME protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 20
95 % 2 206 32
90 % 2 206 35
70 % 2 206 43
50 % 11 225 65
40 % 11 226 79
30 % 11 226 99
Entity #11 | Chains: K,Y
20S PROTEASOME protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 205 21
95 % 2 205 33
90 % 2 205 36
70 % 2 205 44
50 % 2 205 82
40 % 11 225 82
30 % 11 225 100
Entity #12 | Chains: L,Z
20S PROTEASOME protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 4465
95 % 2 194 39
90 % 2 194 45
70 % 2 194 54
50 % 11 213 74
40 % 11 213 92
30 % 24 461 15
Entity #13 | Chains: 1,M
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 18
95 % 2 206 29
90 % 2 206 32
70 % 2 206 40
50 % 2 206 79
40 % 11 225 81
30 % 11 226 98
Entity #14 | Chains: 2,N
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 12
95 % 2 206 22
90 % 2 206 26
70 % 2 206 34
50 % 2 206 78
40 % 11 224 83
30 % 11 224 101
Entity #2 | Chains: B,P
20S PROTEASOME protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 17
95 % 2 206 28
90 % 2 206 31
70 % 2 206 39
50 % 11 226 61
40 % 43 921 3
30 % 74 1600 3
Entity #3 | Chains: C,Q
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 14
95 % 2 206 25
90 % 2 206 28
70 % 2 206 36
50 % 11 226 60
40 % 44 921 3
30 % 75 1600 3
Entity #4 | Chains: D,R
20S PROTEASOME protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 15
95 % 2 206 26
90 % 2 206 29
70 % 2 206 37
50 % 11 225 63
40 % 45 921 3
30 % 76 1600 3
Entity #5 | Chains: E,S
20S PROTEASOME protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 13
95 % 2 206 23
90 % 2 207 24
70 % 2 207 33
50 % 11 227 58
40 % 46 921 3
30 % 77 1600 3
Entity #6 | Chains: F,T
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 23
95 % 2 206 30
90 % 2 206 33
70 % 2 206 41
50 % 11 225 62
40 % 11 225 80
30 % 78 1600 3
Entity #7 | Chains: G,U
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 317
95 % 1 36 468
90 % 1 36 498
70 % 1 36 542
50 % 10 56 317
40 % 10 56 338
30 % 79 1600 3
Entity #8 | Chains: H,V
20S PROTEASOME protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 206 19
95 % 2 206 31
90 % 2 206 34
70 % 2 206 42
50 % 11 224 66
40 % 11 224 84
30 % 25 461 15
Entity #9 | Chains: I,W
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 177 42
95 % 2 206 24
90 % 2 206 27
70 % 2 206 35
50 % 11 226 59
40 % 11 226 77
30 % 11 226 97

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.