Sequence Similarity Clusters for the Entities in PDB 1RYP

Entity #1 | Chains: A,O
20S PROTEASOME protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 16
95 % 2 204 26
90 % 2 204 29
70 % 2 204 37
50 % 2 212 71
40 % 2 213 87
30 % 10 1509 3
Entity #10 | Chains: J,X
20S PROTEASOME protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 20
95 % 2 204 31
90 % 2 204 34
70 % 2 204 43
50 % 2 212 73
40 % 2 213 88
30 % 2 213 107
Entity #11 | Chains: K,Y
20S PROTEASOME protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 203 22
95 % 2 203 32
90 % 2 203 35
70 % 2 203 44
50 % 2 203 82
40 % 2 212 93
30 % 2 212 109
Entity #12 | Chains: L,Z
20S PROTEASOME protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 4426
95 % 2 192 46
90 % 2 192 51
70 % 2 192 61
50 % 2 201 76
40 % 2 201 98
30 % 6 437 16
Entity #13 | Chains: 1,M
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 18
95 % 2 204 28
90 % 2 204 31
70 % 2 204 39
50 % 2 204 80
40 % 2 212 91
30 % 2 213 106
Entity #14 | Chains: 2,N
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 12
95 % 2 204 21
90 % 2 204 25
70 % 2 204 33
50 % 2 204 79
40 % 2 212 89
30 % 2 212 108
Entity #2 | Chains: B,P
20S PROTEASOME protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 17
95 % 2 204 27
90 % 2 204 30
70 % 2 204 38
50 % 2 213 67
40 % 7 869 4
30 % 11 1509 3
Entity #3 | Chains: C,Q
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 14
95 % 2 204 24
90 % 2 204 27
70 % 2 204 35
50 % 2 213 65
40 % 8 869 4
30 % 12 1509 3
Entity #4 | Chains: D,R
20S PROTEASOME protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 15
95 % 2 204 25
90 % 2 204 28
70 % 2 204 36
50 % 2 212 70
40 % 9 869 4
30 % 13 1509 3
Entity #5 | Chains: E,S
20S PROTEASOME protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 13
95 % 2 204 22
90 % 2 205 24
70 % 2 205 32
50 % 2 214 64
40 % 10 869 4
30 % 14 1509 3
Entity #6 | Chains: F,T
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 202 23
95 % 2 204 29
90 % 2 204 32
70 % 2 204 41
50 % 2 212 69
40 % 2 212 90
30 % 15 1509 3
Entity #7 | Chains: G,U
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 314
95 % 1 36 463
90 % 1 36 492
70 % 1 36 538
50 % 1 45 369
40 % 1 45 401
30 % 16 1509 3
Entity #8 | Chains: H,V
20S PROTEASOME protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 204 19
95 % 2 204 30
90 % 2 204 33
70 % 2 204 42
50 % 2 212 72
40 % 2 212 92
30 % 7 437 16
Entity #9 | Chains: I,W
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 175 41
95 % 2 204 23
90 % 2 204 26
70 % 2 204 34
50 % 2 213 66
40 % 2 213 86
30 % 2 213 105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.