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An Information Portal to 110790 Biological Macromolecular Structures

CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST AT 2.4 ANGSTROMS RESOLUTION
Sequence Clustering and Redundancy Reduction Results
1RYP
Sequence Clusters for the Sequence Entities in PDB 1RYP
Entity #1: Chains: A,O - 20S PROTEASOME protein, length: 243 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 19
95% 2 168 31
90% 2 168 35
70% 2 168 48
50% 2 175 71
40% 2 175 91
30% 10 1242 4
Entity #10: Chains: J,X - 20S PROTEASOME protein, length: 204 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 23
95% 2 168 36
90% 2 168 40
70% 2 168 53
50% 2 175 74
40% 2 175 94
30% 2 175 109
Entity #11: Chains: K,Y - 20S PROTEASOME protein, length: 198 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 167 25
95% 2 167 39
90% 2 167 43
70% 2 167 54
50% 2 167 89
40% 2 174 96
30% 2 174 113
Entity #12: Chains: L,Z - 20S PROTEASOME protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 3999
95% 2 160 55
90% 2 160 61
70% 2 160 71
50% 2 167 82
40% 2 167 104
30% 6 366 17
Entity #13: Chains: 1,M - 20S PROTEASOME protein, length: 222 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 21
95% 2 168 33
90% 2 168 37
70% 2 168 50
50% 2 168 86
40% 2 175 92
30% 2 175 108
Entity #14: Chains: 2,N - 20S PROTEASOME protein, length: 233 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 15
95% 2 168 27
90% 2 168 32
70% 2 168 45
50% 2 168 85
40% 2 175 89
30% 2 175 107
Entity #2: Chains: B,P - 20S PROTEASOME protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 20
95% 2 168 32
90% 2 168 36
70% 2 168 49
50% 2 175 72
40% 7 717 4
30% 11 1242 4
Entity #3: Chains: C,Q - 20S PROTEASOME protein, length: 244 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 17
95% 2 168 29
90% 2 168 33
70% 2 168 46
50% 2 175 69
40% 8 717 4
30% 12 1242 4
Entity #4: Chains: D,R - 20S PROTEASOME protein, length: 241 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 18
95% 2 168 30
90% 2 168 34
70% 2 168 47
50% 2 175 70
40% 9 717 4
30% 13 1242 4
Entity #5: Chains: E,S - 20S PROTEASOME protein, length: 242 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 16
95% 2 168 28
90% 2 169 30
70% 2 169 42
50% 2 176 66
40% 10 717 4
30% 14 1242 4
Entity #6: Chains: F,T - 20S PROTEASOME protein, length: 233 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 166 28
95% 2 168 34
90% 2 168 38
70% 2 168 51
50% 2 175 68
40% 2 175 90
30% 15 1242 4
Entity #7: Chains: G,U - 20S PROTEASOME protein, length: 244 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 36 288
95% 1 36 414
90% 1 36 441
70% 1 36 475
50% 1 43 401
40% 1 43 430
30% 16 1242 4
Entity #8: Chains: H,V - 20S PROTEASOME protein, length: 205 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 168 22
95% 2 168 35
90% 2 168 39
70% 2 168 52
50% 2 175 73
40% 2 175 93
30% 7 366 17
Entity #9: Chains: I,W - 20S PROTEASOME protein, length: 222 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 145 43
95% 2 160 54
90% 2 160 60
70% 2 160 70
50% 2 167 81
40% 2 167 103
30% 2 167 121
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.