Sequence Similarity Clusters for the Entities in PDB 1RYP

Entity #1 | Chains: A,O
20S PROTEASOME protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 12
95 % 2 244 20
90 % 2 244 21
70 % 2 244 31
50 % 11 270 44
40 % 11 271 49
30 % 73 1915 3
Entity #10 | Chains: J,X
20S PROTEASOME protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 15
95 % 2 244 25
90 % 2 244 26
70 % 2 244 36
50 % 11 270 45
40 % 11 271 50
30 % 11 271 69
Entity #11 | Chains: K,Y
20S PROTEASOME protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 16
95 % 2 243 26
90 % 2 243 27
70 % 2 243 37
50 % 2 243 68
40 % 11 270 54
30 % 11 270 71
Entity #12 | Chains: L,Z
20S PROTEASOME protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 4693
95 % 2 197 54
90 % 2 197 58
70 % 11 250 25
50 % 11 251 52
40 % 11 251 63
30 % 24 544 12
Entity #13 | Chains: 1,M
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 211 23
95 % 2 244 22
90 % 2 244 23
70 % 2 244 33
50 % 2 244 67
40 % 11 270 53
30 % 11 271 68
Entity #14 | Chains: 2,N
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 8
95 % 2 244 15
90 % 2 244 17
70 % 2 244 27
50 % 2 244 66
40 % 11 262 56
30 % 11 262 74
Entity #2 | Chains: B,P
20S PROTEASOME protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 13
95 % 2 244 21
90 % 2 244 22
70 % 2 244 32
50 % 11 271 41
40 % 43 1101 3
30 % 74 1915 3
Entity #3 | Chains: C,Q
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 10
95 % 2 244 18
90 % 2 244 19
70 % 2 244 29
50 % 11 271 40
40 % 44 1101 3
30 % 75 1915 3
Entity #4 | Chains: D,R
20S PROTEASOME protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 11
95 % 2 244 19
90 % 2 244 20
70 % 2 244 30
50 % 11 270 43
40 % 45 1101 3
30 % 76 1915 3
Entity #5 | Chains: E,S
20S PROTEASOME protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 9
95 % 2 244 16
90 % 2 245 16
70 % 2 245 26
50 % 11 272 38
40 % 46 1101 3
30 % 77 1915 3
Entity #6 | Chains: F,T
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 242 17
95 % 2 244 23
90 % 2 244 24
70 % 2 244 34
50 % 11 270 42
40 % 11 270 52
30 % 78 1915 3
Entity #7 | Chains: G,U
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 396
95 % 1 36 555
90 % 1 36 585
70 % 1 36 618
50 % 10 63 304
40 % 10 63 329
30 % 79 1915 3
Entity #8 | Chains: H,V
20S PROTEASOME protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 244 14
95 % 2 244 24
90 % 2 244 25
70 % 2 244 35
50 % 11 262 49
40 % 11 262 57
30 % 25 544 12
Entity #9 | Chains: I,W
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 215 22
95 % 2 244 17
90 % 2 244 18
70 % 2 244 28
50 % 11 271 39
40 % 11 271 48
30 % 11 271 67

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.