Sequence Similarity Clusters for the Entities in PDB 1RYP

Entity #1 | Chains: A,O
20S PROTEASOME protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 17
95 % 2 199 27
90 % 2 199 31
70 % 2 199 40
50 % 2 207 71
40 % 2 208 84
30 % 10 1474 3
Entity #10 | Chains: J,X
20S PROTEASOME protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 21
95 % 2 199 32
90 % 2 199 36
70 % 2 199 46
50 % 2 207 73
40 % 2 208 85
30 % 2 208 107
Entity #11 | Chains: K,Y
20S PROTEASOME protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 198 22
95 % 2 198 34
90 % 2 198 38
70 % 2 198 49
50 % 2 198 84
40 % 2 207 91
30 % 2 207 109
Entity #12 | Chains: L,Z
20S PROTEASOME protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 4348
95 % 2 190 49
90 % 2 190 55
70 % 2 190 64
50 % 2 199 76
40 % 2 199 95
30 % 6 430 16
Entity #13 | Chains: 1,M
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 19
95 % 2 199 29
90 % 2 199 33
70 % 2 199 42
50 % 2 199 81
40 % 2 207 89
30 % 2 208 106
Entity #14 | Chains: 2,N
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 13
95 % 2 199 22
90 % 2 199 27
70 % 2 199 36
50 % 2 199 80
40 % 2 207 87
30 % 2 207 108
Entity #2 | Chains: B,P
20S PROTEASOME protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 18
95 % 2 199 28
90 % 2 199 32
70 % 2 199 41
50 % 2 208 68
40 % 7 849 4
30 % 11 1474 3
Entity #3 | Chains: C,Q
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 15
95 % 2 199 25
90 % 2 199 29
70 % 2 199 38
50 % 2 208 66
40 % 8 849 4
30 % 12 1474 3
Entity #4 | Chains: D,R
20S PROTEASOME protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 16
95 % 2 199 26
90 % 2 199 30
70 % 2 199 39
50 % 2 207 70
40 % 9 849 4
30 % 13 1474 3
Entity #5 | Chains: E,S
20S PROTEASOME protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 14
95 % 2 199 23
90 % 2 200 26
70 % 2 200 34
50 % 2 209 65
40 % 10 849 4
30 % 14 1474 3
Entity #6 | Chains: F,T
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 197 23
95 % 2 199 30
90 % 2 199 34
70 % 2 199 44
50 % 2 207 69
40 % 2 207 88
30 % 15 1474 3
Entity #7 | Chains: G,U
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 308
95 % 1 36 454
90 % 1 36 482
70 % 1 36 528
50 % 1 45 362
40 % 1 45 391
30 % 16 1474 3
Entity #8 | Chains: H,V
20S PROTEASOME protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 199 20
95 % 2 199 31
90 % 2 199 35
70 % 2 199 45
50 % 2 207 72
40 % 2 207 90
30 % 7 430 16
Entity #9 | Chains: I,W
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 175 41
95 % 2 199 24
90 % 2 199 28
70 % 2 199 37
50 % 2 208 67
40 % 2 208 83
30 % 2 208 105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.