Sequence Similarity Clusters for the Entities in PDB 1RYP

Entity #1 | Chains: A,O
20S PROTEASOME protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 12
95 % 2 243 20
90 % 2 243 21
70 % 2 243 31
50 % 11 269 45
40 % 11 270 49
30 % 73 1908 3
Entity #10 | Chains: J,X
20S PROTEASOME protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 15
95 % 2 243 25
90 % 2 243 26
70 % 2 243 36
50 % 11 269 46
40 % 11 270 50
30 % 11 270 69
Entity #11 | Chains: K,Y
20S PROTEASOME protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 242 16
95 % 2 242 26
90 % 2 242 27
70 % 2 242 37
50 % 2 242 67
40 % 11 269 53
30 % 11 269 70
Entity #12 | Chains: L,Z
20S PROTEASOME protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 4658
95 % 2 197 53
90 % 2 197 57
70 % 11 249 25
50 % 11 250 51
40 % 11 250 61
30 % 24 542 11
Entity #13 | Chains: 1,M
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 211 23
95 % 2 243 22
90 % 2 243 23
70 % 2 243 33
50 % 2 243 66
40 % 11 269 52
30 % 11 270 68
Entity #14 | Chains: 2,N
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 8
95 % 2 243 15
90 % 2 243 17
70 % 2 243 27
50 % 2 243 65
40 % 11 261 55
30 % 11 261 73
Entity #2 | Chains: B,P
20S PROTEASOME protein, length: 250 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 13
95 % 2 243 21
90 % 2 243 22
70 % 2 243 32
50 % 11 270 40
40 % 43 1097 3
30 % 74 1908 3
Entity #3 | Chains: C,Q
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 10
95 % 2 243 18
90 % 2 243 19
70 % 2 243 29
50 % 11 270 39
40 % 44 1097 3
30 % 75 1908 3
Entity #4 | Chains: D,R
20S PROTEASOME protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 11
95 % 2 243 19
90 % 2 243 20
70 % 2 243 30
50 % 11 269 44
40 % 45 1097 3
30 % 76 1908 3
Entity #5 | Chains: E,S
20S PROTEASOME protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 9
95 % 2 243 16
90 % 2 244 16
70 % 2 244 26
50 % 11 271 37
40 % 46 1097 3
30 % 77 1908 3
Entity #6 | Chains: F,T
20S PROTEASOME protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 241 17
95 % 2 243 23
90 % 2 243 24
70 % 2 243 34
50 % 11 269 43
40 % 11 269 51
30 % 78 1908 3
Entity #7 | Chains: G,U
20S PROTEASOME protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 369
95 % 1 36 531
90 % 1 36 571
70 % 1 36 605
50 % 10 63 303
40 % 10 63 329
30 % 79 1908 3
Entity #8 | Chains: H,V
20S PROTEASOME protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 243 14
95 % 2 243 24
90 % 2 243 25
70 % 2 243 35
50 % 11 261 48
40 % 11 261 56
30 % 25 542 11
Entity #9 | Chains: I,W
20S PROTEASOME protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 214 22
95 % 2 243 17
90 % 2 243 18
70 % 2 243 28
50 % 11 270 38
40 % 11 270 48
30 % 11 270 67

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.