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CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST AT 2.4 ANGSTROMS RESOLUTION
Sequence Clustering and Redundancy Reduction Results
1RYP
Sequence Clusters for the Sequence Entities in PDB 1RYP
Entity #1: Chains: A,O - 20S PROTEASOME protein, length: 243 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 88
95% 2 75 132
90% 2 75 142
70% 2 75 170
50% 2 80 188
40% 2 80 216
30% 10 576 9
Entity #10: Chains: J,X - 20S PROTEASOME protein, length: 204 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 93
95% 2 75 137
90% 2 75 147
70% 2 75 175
50% 2 80 191
40% 2 80 219
30% 2 80 234
Entity #11: Chains: K,Y - 20S PROTEASOME protein, length: 198 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 74 97
95% 2 74 143
90% 2 74 153
70% 2 74 180
50% 2 74 219
40% 2 79 221
30% 2 79 240
Entity #12: Chains: L,Z - 20S PROTEASOME protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 5 3722
95% 2 68 158
90% 2 68 171
70% 2 68 199
50% 2 73 206
40% 2 73 237
30% 6 176 31
Entity #13: Chains: 1,M - 20S PROTEASOME protein, length: 222 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 90
95% 2 75 134
90% 2 75 144
70% 2 75 172
50% 2 75 213
40% 2 80 217
30% 2 80 233
Entity #14: Chains: 2,N - 20S PROTEASOME protein, length: 233 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 84
95% 2 75 128
90% 2 75 139
70% 2 75 167
50% 2 75 212
40% 2 80 215
30% 2 80 232
Entity #2: Chains: B,P - 20S PROTEASOME protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 89
95% 2 75 133
90% 2 75 143
70% 2 75 171
50% 2 80 189
40% 7 336 11
30% 11 576 9
Entity #3: Chains: C,Q - 20S PROTEASOME protein, length: 244 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 86
95% 2 75 130
90% 2 75 140
70% 2 75 168
50% 2 80 186
40% 8 336 11
30% 12 576 9
Entity #4: Chains: D,R - 20S PROTEASOME protein, length: 241 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 87
95% 2 75 131
90% 2 75 141
70% 2 75 169
50% 2 80 187
40% 9 336 11
30% 13 576 9
Entity #5: Chains: E,S - 20S PROTEASOME protein, length: 242 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 85
95% 2 75 129
90% 2 76 137
70% 2 76 161
50% 2 81 180
40% 10 336 11
30% 14 576 9
Entity #6: Chains: F,T - 20S PROTEASOME protein, length: 233 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 73 100
95% 2 75 135
90% 2 75 145
70% 2 75 173
50% 2 75 214
40% 2 75 243
30% 15 576 9
Entity #7: Chains: G,U - 20S PROTEASOME protein, length: 244 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 36 281
95% 1 36 400
90% 1 36 425
70% 1 36 454
50% 1 41 409
40% 1 41 436
30% 16 576 9
Entity #8: Chains: H,V - 20S PROTEASOME protein, length: 205 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 75 91
95% 2 75 136
90% 2 75 146
70% 2 75 174
50% 2 80 190
40% 2 80 218
30% 7 176 31
Entity #9: Chains: I,W - 20S PROTEASOME protein, length: 222 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 68 108
95% 2 68 157
90% 2 68 170
70% 2 68 198
50% 2 73 205
40% 2 73 236
30% 2 73 254
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.