Sequence Similarity Clusters for the Entities in PDB 1RVW

Entity #1 | Chains: A
HEMOGLOBIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 184 254 12
95 % 193 265 16 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 193 265 17
70 % 226 332 17
50 % 534 754 4
40 % 539 759 7
30 % 1003 1294 6
Entity #2 | Chains: B
HEMOGLOBIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 160 214 43
95 % 189 250 20 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 193 255 21
70 % 242 346 14
50 % 535 754 4
40 % 540 759 7
30 % 1004 1294 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures