Sequence Similarity Clusters for the Entities in PDB 1RVW

Entity #1 | Chains: A
HEMOGLOBIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29021
95 % 179 245 19 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 180 246 21
70 % 223 327 15
50 % 528 744 4
40 % 533 749 8
30 % 964 1201 8
Entity #2 | Chains: B
HEMOGLOBIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 116 164 51
95 % 185 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 189 250 19
70 % 239 341 13
50 % 529 744 4
40 % 534 749 8
30 % 965 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures