Sequence Similarity Clusters for the Entities in PDB 1RTV

Entity #1 | Chains: A
dTDP-4-dehydrorhamnose 3,5-epimerase protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 21903
95 % 5 5 9459 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 5 5 9351
70 % 5 5 8940
50 % 9 9 4537
40 % 10 10 2288
30 % 15 15 1370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.