POP-OUT | CLOSE

An Information Portal to 105097 Biological Macromolecular Structures

STRUCTURE OF A CATALYTIC COMPLEX OF HIV-1 REVERSE TRANSCRIPTASE: IMPLICATIONS FOR NUCLEOSIDE ANALOG DRUG RESISTANCE
Sequence Clustering and Redundancy Reduction Results
1RTD
Sequence Clusters for the Sequence Entities in PDB 1RTD
Entity #1: Chains: E,G - DNA TEMPLATE FOR REVERSE TRANSCRIPTASE dna, length: 27 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: F,H - DNA PRIMER FOR REVERSE TRANSCRIPTASE dna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A,C - PROTEIN (REVERSE TRANSCRIPTASE) protein, length: 554 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 23741
95% 164 202 62
90% 164 202 65
70% 164 202 81
50% 165 203 118
40% 165 203 140
30% 165 203 162
Entity #4: Chains: B,D - PROTEIN (REVERSE TRANSCRIPTASE) protein, length: 440 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 55 56 397
95% 159 196 69
90% 159 196 73
70% 159 196 90
50% 160 197 120
40% 160 197 146
30% 160 197 173
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.