Sequence Similarity Clusters for the Entities in PDB 1RTA

Entity #1 | Chains: C
DNA (5'-D(*TP*TP*TP*T)-3') dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
PROTEIN (RIBONUCLEASE A (E.C.3.1.27.5)) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 211 219 84
95 % 235 243 73
90 % 256 267 65
70 % 269 281 73
50 % 269 281 101
40 % 350 372 89
30 % 385 463 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures