Sequence Similarity Clusters for the Entities in PDB 1RTA

Entity #1 | Chains: C
DNA (5'-D(*TP*TP*TP*T)-3') dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
PROTEIN (RIBONUCLEASE A (E.C.3.1.27.5)) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 188 196 75
95 % 224 232 71 Flexibility: Low
Max RMSD: 18.1, Avg RMSD: 2.2
PDBFlex
90 % 246 257 64
70 % 259 271 61
50 % 259 271 93
40 % 339 359 85
30 % 604 740 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.