Sequence Similarity Clusters for the Entities in PDB 1RTA

Entity #1 | Chains: C
DNA (5'-D(*TP*TP*TP*T)-3') dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
PROTEIN (RIBONUCLEASE A (E.C.3.1.27.5)) protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 188 196 78
95 % 224 232 73
90 % 246 257 64
70 % 259 271 64
50 % 259 271 95
40 % 339 359 88
30 % 606 742 22

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures