Sequence Similarity Clusters for the Entities in PDB 1RT4

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 56 61 548
95 % 187 256 112 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 3.9
PDBFlex
90 % 187 256 117
70 % 187 256 130
50 % 188 257 157
40 % 189 258 168
30 % 189 258 179
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 52 57 672
95 % 182 250 118 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.5
PDBFlex
90 % 182 250 122
70 % 182 250 137
50 % 184 252 164
40 % 184 252 175
30 % 184 252 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures