Sequence Similarity Clusters for the Entities in PDB 1RT2

Entity #1 | Chains: A
HIV-1 REVERSE TRANSCRIPTASE protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 61 521
95 % 61 248 88
90 % 61 248 93
70 % 61 248 111
50 % 62 249 147
40 % 62 249 162
30 % 62 249 179
Entity #2 | Chains: B
HIV-1 REVERSE TRANSCRIPTASE protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 57 637
95 % 59 242 112 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 59 242 116
70 % 59 242 131
50 % 60 243 154
40 % 60 243 172
30 % 60 243 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.