Sequence Similarity Clusters for the Entities in PDB 1RLB

Entity #1 | Chains: A,B,C,D
TRANSTHYRETIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 13 1175
95 % 248 252 11
90 % 248 252 12
70 % 254 258 18
50 % 258 262 20
40 % 258 262 28
30 % 269 273 31
Entity #2 | Chains: E,F
RETINOL BINDING PROTEIN protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37363
95 % 13 13 4126
90 % 21 23 1867
70 % 22 24 1804
50 % 22 24 1838
40 % 22 24 1849
30 % 22 24 1765

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.