Sequence Similarity Clusters for the Entities in PDB 1RJC

Entity #1 | Chains: A
camelid heavy chain antibody protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48983
95 % 1 1 40582
90 % 1 1 38662
70 % 29 411 9
50 % 35 613 6
40 % 106 5834 1
30 % 149 7269 1
Entity #2 | Chains: B
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 149 717 3
95 % 158 734 3 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 161 751 5
70 % 175 974 7
50 % 175 982 8
40 % 176 1017 10
30 % 176 1017 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1RJC 1 A camelid heavy chain antibody VHH DOMAIN, VARIABLE DOMAIN 9838