Sequence Similarity Clusters for the Entities in PDB 1RJC

Entity #1 | Chains: A
camelid heavy chain antibody protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49906
95 % 1 1 41275
90 % 1 1 39289
70 % 32 424 9
50 % 38 637 6
40 % 109 6003 1
30 % 152 7460 1
Entity #2 | Chains: B
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 153 739 3
95 % 162 756 3 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 165 773 5
70 % 180 997 7
50 % 180 1006 8
40 % 181 1041 10
30 % 181 1041 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1RJC 1 A camelid heavy chain antibody VHH DOMAIN, VARIABLE DOMAIN 9838