Sequence Similarity Clusters for the Entities in PDB 1RJC

Entity #1 | Chains: A
camelid heavy chain antibody protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65452
95 % 1 1 45163
90 % 1 1 42865
70 % 26 372 9
50 % 31 566 7
40 % 45 916 5
30 % 53 1042 7
Entity #2 | Chains: B
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 145 655 3
95 % 146 708 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 149 725 5
70 % 160 942 7
50 % 160 950 8
40 % 161 984 11
30 % 161 984 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1RJC 1 A camelid heavy chain antibody VHH DOMAIN, VARIABLE DOMAIN 9838