Sequence Similarity Clusters for the Entities in PDB 1RJC

Entity #1 | Chains: A
camelid heavy chain antibody protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67290
95 % 1 1 46366
90 % 1 1 43941
70 % 28 397 9
50 % 33 594 7
40 % 47 948 5
30 % 56 1077 7
Entity #2 | Chains: B
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 147 666 3
95 % 148 719 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 151 736 5
70 % 164 956 7
50 % 164 964 8
40 % 165 998 11
30 % 165 998 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures