Sequence Similarity Clusters for the Entities in PDB 1RI8

Entity #1 | Chains: A
camelid ANTIBODY HEAVY CHAIN protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68295
95 % 1 1 47051
90 % 1 1 44566
70 % 92 399 9
50 % 118 599 6
40 % 179 956 5
30 % 201 1085 7
Entity #2 | Chains: B
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 369 668 3
95 % 407 721 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 414 738 5
70 % 581 961 7
50 % 582 969 8
40 % 588 1003 11
30 % 588 1003 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures