Sequence Similarity Clusters for the Entities in PDB 1RI8

Entity #1 | Chains: A
camelid ANTIBODY HEAVY CHAIN protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67522
95 % 1 1 46540
90 % 1 1 44100
70 % 92 397 9
50 % 118 594 7
40 % 179 948 5
30 % 201 1077 7
Entity #2 | Chains: B
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 369 666 3
95 % 407 719 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 414 736 5
70 % 580 956 7
50 % 581 964 8
40 % 587 998 11
30 % 587 998 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures