Sequence Similarity Clusters for the Entities in PDB 1RI8

Entity #1 | Chains: A
camelid ANTIBODY HEAVY CHAIN protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63862
95 % 1 1 44019
90 % 1 1 41816
70 % 81 341 10
50 % 104 525 8
40 % 165 866 5
30 % 186 992 7
Entity #2 | Chains: B
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 352 640 3
95 % 390 693 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 397 710 5
70 % 560 927 7
50 % 561 935 7
40 % 567 969 11
30 % 567 969 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.