Sequence Similarity Clusters for the Entities in PDB 1RC7

Entity #1 | Chains: B,C,D,E
5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Ribonuclease III protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 2511
95 % 3 11 2831 Flexibility: Medium
Max RMSD: 14.3, Avg RMSD: 8.7
PDBFlex
90 % 3 11 2889
70 % 3 11 2853
50 % 3 11 2795
40 % 3 11 2714
30 % 5 14 2090

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures