Sequence Similarity Clusters for the Entities in PDB 1RA6

Entity #1 | Chains: A
Genome polyprotein protein, length: 461 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 15 4529
95 % 2 34 977 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.8
PDBFlex
90 % 2 34 1002
70 % 13 54 633
50 % 13 71 504
40 % 13 71 549
30 % 16 102 410

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4ZP6 1 A Genome polyprotein unp residues 1724-2185 138949
2 4ZPC 1 A RNA-dependent RNA polymerase 138949
3 4ZPB 1 A RNA-directed RNA polymerase unp residues 1724-2185 138949
4 4ZP9 1 A RNA-dependent RNA polymerase unp residues 1724-2185 138949
5 4WFX 1 A RNA-directed RNA polymerase unp residues 1724-2185 138949 2.7.7.48 | Details
6 4WFZ 1 A RNA-directed RNA polymerase unp residues 1724-2185 138949 2.7.7.48 | Details
7 4ZPD 1 A RNA-directed RNA polymerase 138949
8 4ZP7 1 A Genome polyprotein unp residues 1724-2185 138949
9 4ZP8 1 A RNA-dependent RNA polymerase unp residues 1724-2185 138949
10 4WFY 1 A RNA-directed RNA polymerase unp residues 1724-2185 138949 2.7.7.48 | Details
11 3CDU 1 A RNA-directed RNA polymerase 3D-POL 138949 2.7.7.48 | Details
12 4NLR 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
13 1RA6 1 A Genome polyprotein RNA-directed RNA polymerase (residue 1748-2208) 138950 2.7.7.48 | Details
14 4NLS 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
15 4K4Z 1 A, E, I, M RNA-dependent RNA polymerase UNP RESIDUES 1724-2185 138949 2.7.7.48 | Details
16 4NLW 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
17 4NLU 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
18 3OL9 1 A, E, I, M Polymerase 138950 2.7.7.48 | Details
19 3DDK 1 A RNA polymerase B3 3Dpol 138949
20 4NLP 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
21 4NLO 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
22 4NLY 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
23 4NLV 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
24 3CDW 1 A RNA-directed RNA polymerase 3D-POL 138949 2.7.7.48 | Details
25 4K4X 1 A, E, I, M RNA-dependent RNA polymerase UNP RESIDUES 1724-2185 138949 2.7.7.48 | Details
26 4K4S 1 A, E RNA-directed RNA polymerase 3D-POL unp residues 1749-2209 138950 2.7.7.48 | Details
27 4NLQ 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
28 5XE0 1 A Genome polyprotein UNP residues 1732-2188 138951
29 5F8H 1 A Genome polyprotein UNP residues 1732-2193 138948 2.7.7.48 | Details
30 2IM0 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
31 5F8N 1 A Genome polyprotein UNP residues 1732-2193 138948 2.7.7.48 | Details
32 1RA7 1 A Genome polyprotein RNA-directed RNA polymerase (residue 1748-2208) 138950 2.7.7.48 | Details
33 3N6M 1 A RNA-dependent RNA polymerase 138948
34 1TQL 1 A RNA-directed RNA polymerase 138950 2.7.7.48 | Details
35 5F8I 1 A Genome polyprotein UNP residues 1732-2193 138948 2.7.7.48 | Details
36 2IM2 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
37 3OLB 1 A, E, I, M Polymerase UNP RESIDUES 1749-2209 138950 2.7.7.48 | Details
38 5F8J 1 A Genome polyprotein UNP residues 1732-2193 138948 2.7.7.48 | Details
39 3OL6 1 A, E, I, M Polymerase UNP RESIDUES 1749-2209 138950 2.7.7.48 | Details
40 5Y6Z 1 A, E Genome polyprotein UNP residues 1732-2193 138948
41 1XR7 1 A, B Genome polyprotein RNA-DIRECTED RNA POLYMERASE 147711 2.7.7.48 | Details
42 4NLT 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
43 4NLX 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
44 1TP7 1 A, B, C, D Genome polyprotein RNA-directed RNA Polymerase (residues 1694-2153) 147711 2.7.7.48 | Details
45 1RDR 1 A POLIOVIRUS 3D POLYMERASE 138950 2.7.7.48 | Details
46 2ILZ 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
47 1XR6 1 A Genome polyprotein RNA-DIRECTED RNA POLYMERASE 147711 2.7.7.48 | Details
48 4K4Y 1 A, E, I, M RNA-dependent RNA polymerase 138949
49 5F8G 1 A Genome polyprotein UNP residues 1732-2193 138948
50 4Y34 1 A 3D polymerase 138949
51 4ZPA 1 A RNA-directed RNA polymerase 138949
52 3OLA 1 A, E, I, M Polymerase UNP RESIDUES 1749-2209 138950 2.7.7.48 | Details
53 3N6L 1 A RNA-dependent RNA polymerase 138948
54 2IM1 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
55 4K4T 1 A, E RNA-directed RNA polymerase 3D-POL unp residues 1749-2209 138950 2.7.7.48 | Details
56 5F8M 1 A Genome polyprotein UNP residues 1732-2193 138948 2.7.7.48 | Details
57 4K4W 1 A, E RNA-directed RNA polymerase 3D-POL unp residues 1749-2209 138950 2.7.7.48 | Details
58 2ILY 1 A Poliovirus polymerase RNA-directed RNA polymerase, residues 461-1748 138950 2.7.7.48 | Details
59 5F8L 1 A Genome polyprotein UNP residues 1732-2193 138948 2.7.7.48 | Details
60 4IKA 1 A 3Dpol UNP residues 1732-2193 138948
61 4K50 1 A, E, I, M RNA polymerase 3D-POL unp residues 1694-2153 147711 2.7.7.48 | Details
62 2IM3 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
63 4R0E 1 A RNA-directed RNA polymerase 138950 2.7.7.48 | Details
64 4K4V 1 A, E RNA-directed RNA polymerase 3D-POL unp residues 1749-2209 138950 2.7.7.48 | Details
65 4Y2A 1 A 3D polymerase 138949
66 3OL7 1 A, E, I, M Polymerase UNP RESIDUES 1749-2209 138950 2.7.7.48 | Details
67 3OL8 1 A, E, I, M Polymerase UNP RESIDUES 1749-2209 138950 2.7.7.48 | Details
68 4K4U 1 A, E RNA-directed RNA polymerase 3D-POL unp residues 1749-2209 138950 2.7.7.48 | Details
69 2IJF 1 A RNA-directed RNA polymerase 138950 2.7.7.48 | Details
70 3N6N 1 A RNA-dependent RNA polymerase 138948
71 1XR5 1 A Genome polyprotein RNA-DIRECTED RNA POLYMERASE 147712 2.7.7.48 | Details