Sequence Similarity Clusters for the Entities in PDB 1RA6

Entity #1 | Chains: A
Genome polyprotein protein, length: 461 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 15 4341
95 % 2 34 932 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 0.8
PDBFlex
90 % 2 34 962
70 % 13 54 597
50 % 13 71 488
40 % 13 71 537
30 % 16 100 398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4NLR 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
2 1RA6 1 A Genome polyprotein RNA-directed RNA polymerase (residue 1748-2208) 138950 2.7.7.48 | Details
3 4NLS 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
4 4NLU 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
5 4NLY 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
6 2IM0 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
7 1RA7 1 A Genome polyprotein RNA-directed RNA polymerase (residue 1748-2208) 138950 2.7.7.48 | Details
8 1TQL 1 A RNA-directed RNA polymerase 138950 2.7.7.48 | Details
9 2IM2 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
10 4NLT 1 A RNA-directed RNA polymerase 3D-POL 138950 2.7.7.48 | Details
11 2ILZ 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
12 2IM1 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
13 2ILY 1 A Poliovirus polymerase RNA-directed RNA polymerase, residues 461-1748 138950 2.7.7.48 | Details
14 2IM3 1 A poliovirus polymerase RNA-directed RNA polymerase, residues 1748-2208 138950 2.7.7.48 | Details
15 2IJF 1 A RNA-directed RNA polymerase 138950 2.7.7.48 | Details